bcl2fastq2 2.20.0-GCC-11.3.0

bcl2fastq Conversion Software both demultiplexes data and converts BCL files generated by Illumina sequencing systems to standard FASTQ file formats for downstream analysis.

Accessing bcl2fastq2 2.20.0-GCC-11.3.0

To load the module for bcl2fastq2 2.20.0-GCC-11.3.0 please use this command on the BEAR systems (BlueBEAR and BEAR Cloud VMs):

📋 module load bear-apps/2022a
module load bcl2fastq2/2.20.0-GCC-11.3.0

BEAR Apps Version




The listed architectures consist of two part: OS-CPU. The OS used is represented by EL and there are several different processor (CPU) types available on BlueBEAR. More information about the processor types on BlueBEAR is available on the BlueBEAR Job Submission page.

More Information

For more information visit the bcl2fastq2 website.


This version of bcl2fastq2 has a direct dependency on: GCC/11.3.0 libxml2/2.9.13-GCCcore-11.3.0 libxslt/1.1.34-GCCcore-11.3.0 zlib/1.2.12-GCCcore-11.3.0

Required By

This version of bcl2fastq2 is a direct dependent of: SpaceRanger/2.0.1-GCC-11.3.0

Other Versions

These versions of bcl2fastq2 are available on the BEAR systems (BlueBEAR and BEAR Cloud VMs). These will be retained in accordance with our Applications Support and Retention Policy.

Version BEAR Apps Version
2.20.0-GCC-9.3.0 2020a

Last modified on 28th April 2023