BCFtools 1.17-GCC-12.2.0

Samtools is a suite of programs for interacting with high-throughput sequencing data. BCFtools - Reading/writing BCF2/VCF/gVCF files and calling/filtering/summarising SNP and short indel sequence variants

Accessing BCFtools 1.17-GCC-12.2.0

To load the module for BCFtools 1.17-GCC-12.2.0 please use this command on the BEAR systems (BlueBEAR, BEAR Cloud VMs, and CaStLeS VMs):

module load bear-apps/2022b
module load BCFtools/1.17-GCC-12.2.0

BEAR Apps Version

2022b

Architectures

EL8-cascadelakeEL8-icelake

The listed architectures consist of two part: OS-CPU. The OS used is represented by EL and there are several different processor (CPU) types available on BlueBEAR. More information about the processor types on BlueBEAR is available on the BlueBEAR Job Submission page.

More Information

For more information visit the BCFtools website.

Dependencies

This version of BCFtools has a direct dependency on: bzip2/1.0.8-GCCcore-12.2.0 GCC/12.2.0 GSL/2.7-GCC-12.2.0 HTSlib/1.17-GCC-12.2.0 XZ/5.2.7-GCCcore-12.2.0 zlib/1.2.12-GCCcore-12.2.0

Required By

This version of BCFtools is a direct dependent of: AUGUSTUS/3.5.0-foss-2022b

Other Versions

These versions of BCFtools are available on the BEAR systems (BlueBEAR, BEAR Cloud VMs, and CaStLeS VMs). These will be retained in accordance with our Applications Support and Retention Policy.

Last modified on 8th November 2023