STAR 2.7.11a-GCC-12.2.0

STAR aligns RNA-seq reads to a reference genome using uncompressed suffix arrays.

Accessing STAR 2.7.11a-GCC-12.2.0

To load the module for STAR 2.7.11a-GCC-12.2.0 please use this command on the BEAR systems (BlueBEAR, BEAR Cloud VMs, and CaStLeS VMs):

module load bear-apps/2022b
module load STAR/2.7.11a-GCC-12.2.0

BEAR Apps Version

2022b

Architectures

EL8-cascadelakeEL8-icelake

The listed architectures consist of two part: OS-CPU. The OS used is represented by EL and there are several different processor (CPU) types available on BlueBEAR. More information about the processor types on BlueBEAR is available on the BlueBEAR Job Submission page.

More Information

For more information visit the STAR website.

Dependencies

This version of STAR has a direct dependency on: GCC/12.2.0 HTSlib/1.17-GCC-12.2.0 zlib/1.2.12-GCCcore-12.2.0

Required By

This version of STAR is a direct dependent of: RSEM/1.3.3-foss-2022b Trinity/2.15.1-foss-2022b

Other Versions

These versions of STAR are available on the BEAR systems (BlueBEAR, BEAR Cloud VMs, and CaStLeS VMs). These will be retained in accordance with our Applications Support and Retention Policy.

Last modified on 15th November 2023