AUGUSTUS 3.5.0-foss-2023a

There is a newer install of AUGUSTUS

AUGUSTUS is a program that predicts genes in eukaryotic genomic sequences

Accessing AUGUSTUS 3.5.0-foss-2023a

To load the module for AUGUSTUS 3.5.0-foss-2023a please use this command on the BEAR systems (BlueBEAR and BEAR Cloud VMs):

📋 module load bear-apps/2023a module load AUGUSTUS/3.5.0-foss-2023a

BEAR Apps Version

2023a

Architectures

EL8-icelake — EL8-sapphirerapids

The listed architectures consist of two parts: OS-CPU. The OS used is represented by EL and there are several different processor (CPU) types available on BlueBEAR. More information about the processor types on BlueBEAR is available on the BlueBEAR Job Submission page.

More Information

For more information visit the AUGUSTUS website.

Dependencies

This version of AUGUSTUS has a direct dependency on: BamTools/2.5.2-GCC-12.3.0 BCFtools/1.18-GCC-12.3.0 Boost/1.82.0-GCC-12.3.0 foss/2023a GSL/2.7-GCC-12.3.0 HTSlib/1.18-GCC-12.3.0 lpsolve/5.5.2.11-GCC-12.3.0 SAMtools/1.18-GCC-12.3.0 SQLite/3.42.0-GCCcore-12.3.0 SuiteSparse/7.1.0-foss-2023a zlib/1.2.13-GCCcore-12.3.0

Required By

This version of AUGUSTUS is a direct dependent of: BUSCO/5.8.2-foss-2023a

Other Versions

These versions of AUGUSTUS are available on the BEAR systems (BlueBEAR and BEAR Cloud VMs). These will be retained in accordance with our Applications Support and Retention Policy.

Version	BEAR Apps Version
3.5.0-foss-2022b	2022b
3.5.0-foss-2022a	2022a
3.3.3-foss-2019b	2019b
3.3.2-foss-2018b-Python-2.7.15	2018b

Last modified on 18th June 2025