NiBabel 5.2.0-gfbf-2023a

There is a newer install of NiBabel

NiBabel provides read/write access to some common medical and neuroimaging file formats, including: ANALYZE (plain, SPM99, SPM2 and later), GIFTI, NIfTI1, NIfTI2, MINC1, MINC2, MGH and ECAT as well as Philips PAR/REC. We can read and write Freesurfer geometry, and read Freesurfer morphometry and annotation files. There is some very limited support for DICOM. NiBabel is the successor of PyNIfTI.

Accessing NiBabel 5.2.0-gfbf-2023a

To load the module for NiBabel 5.2.0-gfbf-2023a please use this command on the BEAR systems (BlueBEAR and BEAR Cloud VMs):

📋 module load bear-apps/2023a module load NiBabel/5.2.0-gfbf-2023a

BEAR Apps Version

2023a

Architectures

EL8-cascadelake — EL8-icelake — EL8-sapphirerapids

The listed architectures consist of two part: OS-CPU. The OS used is represented by EL and there are several different processor (CPU) types available on BlueBEAR. More information about the processor types on BlueBEAR is available on the BlueBEAR Job Submission page.

Extensions

bz2file 0.98
nibabel 5.2.0

More Information

For more information visit the NiBabel website.

Dependencies

This version of NiBabel has a direct dependency on: gfbf/2023a Pillow/10.0.0-GCCcore-12.3.0 pydicom/2.4.4-GCCcore-12.3.0 Python/3.11.3-GCCcore-12.3.0 SciPy-bundle/2023.07-gfbf-2023a

Required By

This version of NiBabel is a direct dependent of: Nilearn/0.10.3-gfbf-2023a

Other Versions

These versions of NiBabel are available on the BEAR systems (BlueBEAR and BEAR Cloud VMs). These will be retained in accordance with our Applications Support and Retention Policy.

Version	BEAR Apps Version
5.2.0-gfbf-2022b	2022b
4.0.2-foss-2022a	2022a
3.2.2-foss-2021b	2021b
3.2.1-foss-2021a	2021a
3.2.1-foss-2020a-Python-3.8.2	2020a
3.1.0-foss-2019b-Python-3.7.4	2019b
3.1.0-foss-2019a-Python-3.7.2	2019a
2.4.0-foss-2019a	2019a
2.3.0-foss-2018b-Python-3.6.6	2018b

Last modified on 22nd July 2024