Seurat 4.0.4-foss-2020b-R-4.0.3

Seurat is an R package designed for QC, analysis, and exploration of single cell RNA-seq data.

Accessing Seurat 4.0.4-foss-2020b-R-4.0.3

To load the module for Seurat 4.0.4-foss-2020b-R-4.0.3 please use this command on the BEAR systems (BlueBEAR and BEAR Cloud VMs):

📋 module load Seurat/4.0.4-foss-2020b-R-4.0.3

BEAR Apps Version

2020b

Architectures

EL8-cascadelake — EL8-icelake — EL8-sapphirerapids

The listed architectures consist of two part: OS-CPU. The OS used is represented by EL and there are several different processor (CPU) types available on BlueBEAR. More information about the processor types on BlueBEAR is available on the BlueBEAR Job Submission page.

Extensions

Matrix-1.3-4
Rcpp 1.0.7
Seurat 4.0.4
SeuratObject 4.0.2
spatstat.core-2.3-0
spatstat.data-2.1-0
spatstat.geom-2.2-2
spatstat.sparse-2.0-0
spatstat.utils-2.2-0

More Information

For more information visit the Seurat website.

Dependencies

This version of Seurat has a direct dependency on: foss/2020b R/4.0.3-foss-2020b R-bundle-Bioconductor/3.12-foss-2020b-R-4.0.3

Required By

This version of Seurat is a direct dependent of: Signac/1.3.0-foss-2020b-R-4.0.3

Other Versions

These versions of Seurat are available on the BEAR systems (BlueBEAR and BEAR Cloud VMs). These will be retained in accordance with our Applications Support and Retention Policy.

Version	BEAR Apps Version
5.0.0-foss-2022b-R-4.3.1	2022b
4.0.0-foss-2020a-R-4.0.0	2020a
3.2.0-foss-2019b-R-3.6.2	2019b
3.1.5-foss-2019b-R-3.6.2	2019b
3.1.1-foss-2019a-R-3.6.0	2019a
af2925c-foss-2020b-R-4.0.3	2020b

Last modified on 14th September 2021