DendroPy 4.5.2-GCCcore-11.2.0A Python library for phylogenetics and phylogenetic computing: reading, writing, simulation, processing and manipulation of phylogenetic trees (phylogenies) and characters.
Accessing DendroPy 4.5.2-GCCcore-11.2.0
To load the module for DendroPy 4.5.2-GCCcore-11.2.0 please use this command on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs):
module load bear-apps/2021b
module load DendroPy/4.5.2-GCCcore-11.2.0
BEAR Apps Version
EL8-cascadelake — EL8-haswell — EL8-icelake
The listed architectures consist of two part: OS-CPU.
- BlueBEAR: The OS used on BlueBEAR is represented by EL and there are several different processor (CPU) types available on BlueBEAR. More information about the processor types on BlueBEAR is available on the BlueBEAR Job Submission page.
- BEAR and CaStLeS Cloud VMs: These VMs can have one of two OSes. Those with access to a BEAR Cloud or CaStLeS VM should check that the listed architectures for an application include the OS of VM being used. The VMs, irrespective of OS, will use the haswell CPU type.
For more information visit the DendroPy website.
This version of DendroPy has a direct dependency on: GCCcore/11.2.0 Python/3.9.6-GCCcore-11.2.0
This version of DendroPy is a direct dependent of: MetaPhlAn/3.0.14-foss-2021b panaroo/1.3.2-foss-2021b PhyloPhlAn/3.0.2-foss-2021b SEPP/4.5.1-foss-2021b
These versions of DendroPy are available on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs). These will be retained in accordance with our Applications Support and Retention Policy.
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Last modified on 14th July 2022