BUSCO 5.4.7-foss-2022b

BUSCO: assessing genome assembly and annotation completeness with single-copy orthologs

Accessing BUSCO 5.4.7-foss-2022b

To load the module for BUSCO 5.4.7-foss-2022b please use this command on the BEAR systems (BlueBEAR and BEAR Cloud VMs):

📋 module load bear-apps/2022b module load BUSCO/5.4.7-foss-2022b

BEAR Apps Version

2022b

Architectures

EL8-cascadelake — EL8-icelake — EL8-sapphirerapids

The listed architectures consist of two part: OS-CPU. The OS used is represented by EL and there are several different processor (CPU) types available on BlueBEAR. More information about the processor types on BlueBEAR is available on the BlueBEAR Job Submission page.

More Information

For more information visit the BUSCO website.

Dependencies

This version of BUSCO has a direct dependency on: AUGUSTUS/3.5.0-foss-2022b BBMap/39.01-GCC-12.2.0 Biopython/1.81-foss-2022b BLAST+/2.14.0-gompi-2022b foss/2022b HMMER/3.3.2-gompi-2022b MetaEuk/6-GCC-12.2.0 prodigal/2.6.3-GCCcore-12.2.0 Python/3.10.8-GCCcore-12.2.0 R/4.3.1-foss-2022b SciPy-bundle/2023.02-gfbf-2022b SEPP/4.5.1-foss-2022b

Other Versions

These versions of BUSCO are available on the BEAR systems (BlueBEAR and BEAR Cloud VMs). These will be retained in accordance with our Applications Support and Retention Policy.

Version	BEAR Apps Version
4.0.5-foss-2019b-Python-3.7.4	2019b
3.0.2-foss-2018b-Python-2.7.15	2018b

Last modified on 16th January 2024