Java 11

There is a newer install of Java

Java Platform, Standard Edition (Java SE) lets you develop and deploy Java applications on desktops and servers.

Accessing Java 11

To load the module for Java 11 please use this command on the BEAR systems (BlueBEAR and BEAR Cloud VMs):

📋 module load Java/11

BEAR Apps Version

2021a

Architectures

EL8-cascadelakeEL8-icelakeEL8-sapphirerapidssystem

The listed architectures consist of two part: OS-CPU. The OS used is represented by EL and there are several different processor (CPU) types available on BlueBEAR. More information about the processor types on BlueBEAR is available on the BlueBEAR Job Submission page.

More Information

For more information visit the Java website.

Required By

This version of Java is a direct dependent of: aicsimageio/4.9.4-foss-2021b ant/1.10.14-Java-11 ant/1.10.9-Java-11 ant/1.10.12-Java-11 ant/1.10.8-Java-11 ant/1.10.7-Java-11 ant/1.10.11-Java-11 ANTLR/2.7.7-foss-2019a ANTLR/2.7.7-GCCcore-9.3.0-Java-11 Bazel/3.6.0-GCCcore-9.3.0 Bazel/4.2.2-GCCcore-11.2.0 Bazel/0.26.1-GCCcore-8.3.0 Bazel/3.7.2-GCCcore-10.3.0 Bazel/3.7.2-GCCcore-11.2.0 Bazel/2.0.0-GCCcore-8.3.0 Bazel/3.7.2-GCCcore-10.2.0 Bazel/5.1.1-GCCcore-11.3.0 Bazel/6.3.1-GCCcore-12.2.0 BBMap/38.87-GCC-8.3.0 BBMap/39.01-GCC-12.2.0 BBMap/38.90-GCC-10.2.0 Beagle/5.1-25Nov19.28d-Java-11 beagle-lib/3.1.2-GCC-9.3.0 BMDExpress2/2.30.0502 canu/2.2-GCCcore-11.3.0 canu/1.9-GCCcore-8.3.0-Perl-5.30.0 cell2location/0.05-alpha-foss-2020b CPLEX/20.10-GCCcore-10.2.0 CST-Studio-Suite/2022.SP4-GCCcore-10.3.0-Java-11 DualSPHysics/5.0.164-foss-2020a-Java-11 DualSPHysics/5.0.175-foss-2021a DualSPHysics/5.0.175-foss-2021a-CUDA-11.3.1 DualSPHysics/5.0.233-foss-2022a DualSPHysics/5.0.233-foss-2022a-CUDA-11.7.0 esoreflex/2.11.5-foss-2020b FastQC/0.11.9-Java-11 GATK/4.2.0.0-GCCcore-10.2.0-Java-11 GATK/4.3.0.0-GCCcore-12.2.0-Java-11 GATK/4.1.5.0-GCCcore-9.3.0-Java-11 GingerALE/3.0.2 Graphviz/2.47.0-GCCcore-10.2.0-Java-11 Graphviz/2.50.0-GCCcore-11.2.0 Graphviz/8.1.0-GCCcore-12.2.0 Graphviz/5.0.0-GCCcore-11.3.0 Graphviz/2.47.2-GCCcore-10.3.0 Graphviz/2.44.1-foss-2020a Groovy/4.0.3-Java-11 hyperopt/0.2.5-foss-2020b IGV/2.6.2-Java-11 IGV/2.8.0-Java-11 IGV/2.16.0-Java-11 InterProScan/5.55-88.0-foss-2021a InterProScan/5.61-93.0-foss-2022a Jblob/3.0 KneadData/0.7.6-foss-2019b-Python-3.7.4-Java-11 MALLET/202108 MCR/R2016a Micro-Manager/1.4.24-foss-2021b MiXCR/4.3.2-Java-11 MuTect/1.1.7-Java-11 neuropythy/0.11.8-foss-2019b-Python-3.7.4-Java-11 Nextflow/22.04.0 NGS/2.10.4-GCCcore-8.3.0-Java-11 NGS/2.9.6-foss-2019a-Java-11 NGS/2.10.9-GCCcore-10.2.0 OpenCV/4.5.3-foss-2021a-contrib OpenCV/4.8.0-foss-2022b-contrib OpenCV/4.2.0-foss-2019b-Python-3.7.4 OpenCV/4.6.0-foss-2022a-contrib OpenCV/4.4.0-foss-2020a-Python-3.8.2 OpenCV/4.5.3-foss-2021a-CUDA-11.3.1-contrib OpenCV/4.5.1-foss-2020b-contrib OpenCV/4.6.0-foss-2022a-CUDA-11.7.0-contrib OpenCV/4.5.5-foss-2021b-contrib picard/2.27.5-Java-11 picard/2.21.1-Java-11 picard/2.25.1-Java-11 Pilon/1.23-Java-11 polymake/4.8-gfbf-2022a prokka/1.14.5-gompi-2021b prokka/1.14.5-gompi-2019b PyImageJ/1.3.1-foss-2021a python-bioformats/4.0.0-foss-2019b-Python-3.7.4 python-bioformats/4.0.0-foss-2020a-Python-3.8.2 Qualimap/2.2.1-foss-2019b-R-3.6.2 QUAST/5.2.0-foss-2022a QuPath/0.3.2-Java-11 R/4.1.0-foss-2021a R/4.1.2-foss-2021b R/4.2.0-foss-2021b R/3.6.2-foss-2019b R/4.0.0-foss-2020a R/4.2.3-foss-2022a R/3.6.0-foss-2019a R/4.3.1-foss-2022b R/4.0.3-foss-2020b RNA-SeQC/1.1.8-foss-2019b-Java-11 RNAstructure/6.2-foss-2019b-Python-3.7.4 rstudio/1.2.5042-foss-2020a-Java-11-R-4.0.0 rstudio/1.3.959-foss-2019b-R-3.6.2 rstudio/1.3.959-foss-2020a-Java-11-R-4.0.0 rstudio/1.2.5033-foss-2019b-R-3.6.2 RStudio-Server/1.4.1717-foss-2021a-Java-11-R-4.1.0 RStudio-Server/1.4.1717-foss-2020b-Java-11-R-4.0.3 RStudio-Server/1.3.1093-foss-2020b-Java-11-R-4.0.3 RStudio-Server/1.3.1093-foss-2021a-Java-11-R-4.1.0 RStudio-Server/1.4.1717-foss-2021b-Java-11-R-4.2.0 RTG-Tools/3.12.1-Java-11 Scipion/3.1.0-foss-2021a-CUDA-11.3.1 Scipion/3.0.12-foss-2021a-CUDA-11.3.1 snippy/4.6.0-foss-2019b-Perl-5.30.0 snpEff/5.0e-GCCcore-11.2.0-Java-11 Spark/3.1.1-foss-2020b Spark/2.4.4-foss-2019a-Hadoop-2.7-Java-11-Python-3.7.2 SRA-Toolkit/3.0.10-gompi-2022b STAR-CCM+/17.02.008 STAR-CCM+/18.02.008 Talairach/2.4.3 Trim_Galore/0.6.5-GCCcore-8.3.0-Java-11-Python-3.7.4 Trimmomatic/0.39-Java-11 Trinity/2.9.1-foss-2019b-Python-2.7.16 Trinity/2.15.1-foss-2022b Trinity/2.9.1-foss-2019b-Python-3.7.4 WEKA/3.8.4-Java-11 Xmipp/3.22.07-Helios-foss-2021a-CUDA-11.3.1

Other Versions

These versions of Java are available on the BEAR systems (BlueBEAR and BEAR Cloud VMs). These will be retained in accordance with our Applications Support and Retention Policy.

Last modified on 26th July 2021