Java 11
There is a newer install of Java
Java Platform, Standard Edition (Java SE) lets you develop and deploy Java applications on desktops and servers.Accessing Java 11
To load the module for Java 11 please use this command on the BEAR systems (BlueBEAR and BEAR Cloud VMs):
📋
module load bear-apps/2021b
module load Java/11
BEAR Apps Version
Architectures
EL8-cascadelake — EL8-icelake — EL8-sapphirerapids — system
The listed architectures consist of two part: OS-CPU. The OS used is represented by EL and there are several different processor (CPU) types available on BlueBEAR. More information about the processor types on BlueBEAR is available on the BlueBEAR Job Submission page.
More Information
For more information visit the Java website.
Required By
This version of Java is a direct dependent of: aicsimageio/4.9.4-foss-2021b ant/1.10.9-Java-11 ant/1.10.8-Java-11 ant/1.10.14-Java-11 ant/1.10.7-Java-11 ant/1.10.12-Java-11 ant/1.10.11-Java-11 ANTLR/2.7.7-GCCcore-9.3.0-Java-11 ANTLR/2.7.7-foss-2019a Bazel/4.2.2-GCCcore-11.2.0 Bazel/5.1.1-GCCcore-11.3.0 Bazel/3.7.2-GCCcore-10.2.0 Bazel/6.3.1-GCCcore-12.3.0 Bazel/3.7.2-GCCcore-11.2.0 Bazel/2.0.0-GCCcore-8.3.0 Bazel/3.7.2-GCCcore-10.3.0 Bazel/6.1.0-GCCcore-12.3.0 Bazel/3.6.0-GCCcore-9.3.0 Bazel/6.3.1-GCCcore-12.2.0 Bazel/0.26.1-GCCcore-8.3.0 BBMap/38.90-GCC-10.2.0 BBMap/39.01-GCC-12.2.0 BBMap/38.87-GCC-8.3.0 Beagle/5.1-25Nov19.28d-Java-11 beagle-lib/3.1.2-GCC-9.3.0 BMDExpress2/2.30.0502 canu/2.2-GCCcore-11.3.0 canu/1.9-GCCcore-8.3.0-Perl-5.30.0 cell2location/0.05-alpha-foss-2020b CPLEX/20.10-GCCcore-10.2.0 CST-Studio-Suite/2022.SP4-GCCcore-10.3.0-Java-11 DualSPHysics/5.0.175-foss-2021a DualSPHysics/5.0.233-foss-2022a DualSPHysics/5.0.164-foss-2020a-Java-11 DualSPHysics/5.0.175-foss-2021a-CUDA-11.3.1 DualSPHysics/5.0.233-foss-2022a-CUDA-11.7.0 esoreflex/2.11.5-foss-2020b FastQC/0.11.9-Java-11 GATK/4.1.5.0-GCCcore-9.3.0-Java-11 GATK/4.3.0.0-GCCcore-11.3.0-Java-11 GATK/4.2.0.0-GCCcore-10.2.0-Java-11 GATK/4.3.0.0-GCCcore-12.2.0-Java-11 GingerALE/3.0.2 Graphviz/8.1.0-GCCcore-12.2.0 Graphviz/2.44.1-foss-2020a Graphviz/2.47.2-GCCcore-10.3.0 Graphviz/2.47.0-GCCcore-10.2.0-Java-11 Graphviz/2.50.0-GCCcore-11.2.0 Graphviz/8.1.0-GCCcore-12.3.0 Graphviz/5.0.0-GCCcore-11.3.0 Groovy/4.0.3-Java-11 hyperopt/0.2.5-foss-2020b IGV/2.8.0-Java-11 IGV/2.16.0-Java-11 IGV/2.6.2-Java-11 InterProScan/5.55-88.0-foss-2021a InterProScan/5.68-100.0-foss-2023a InterProScan/5.70-102.0-foss-2023a InterProScan/5.61-93.0-foss-2022a Jblob/3.0 KneadData/0.7.6-foss-2019b-Python-3.7.4-Java-11 MALLET/202108 MCR/R2016a Micro-Manager/1.4.24-foss-2021b MiXCR/4.3.2-Java-11 MuTect/1.1.7-Java-11 neuropythy/0.11.8-foss-2019b-Python-3.7.4-Java-11 Nextflow/22.04.0 Nextflow/24.04.2 NGS/2.9.6-foss-2019a-Java-11 NGS/2.10.9-GCCcore-10.2.0 NGS/2.10.4-GCCcore-8.3.0-Java-11 OpenCV/4.6.0-foss-2022a-CUDA-11.7.0-contrib OpenCV/4.4.0-foss-2020a-Python-3.8.2 OpenCV/4.8.0-foss-2022b-contrib OpenCV/4.5.3-foss-2021a-contrib OpenCV/4.5.3-foss-2021a-CUDA-11.3.1-contrib OpenCV/4.5.1-foss-2020b-contrib OpenCV/4.6.0-foss-2022a-contrib OpenCV/4.2.0-foss-2019b-Python-3.7.4 OpenCV/4.8.1-foss-2023a-CUDA-12.1.1-contrib OpenCV/4.8.1-foss-2023a-contrib OpenCV/4.5.5-foss-2021b-contrib picard/2.25.1-Java-11 picard/2.27.5-Java-11 picard/2.21.1-Java-11 Pilon/1.23-Java-11 polymake/4.8-gfbf-2022a prokka/1.14.5-gompi-2019b prokka/1.14.5-gompi-2022a prokka/1.14.5-gompi-2021b PyImageJ/1.3.1-foss-2021a python-bioformats/4.0.0-foss-2020a-Python-3.8.2 python-bioformats/4.0.0-foss-2019b-Python-3.7.4 Qualimap/2.2.1-foss-2019b-R-3.6.2 QUAST/5.2.0-foss-2022a QuPath/0.3.2-Java-11 R/4.1.0-foss-2021a R/3.6.2-foss-2019b R/4.0.3-foss-2020b R/3.6.0-foss-2019a R/4.0.0-foss-2020a R/4.4.1-gfbf-2023a R/4.1.2-foss-2021b R/4.2.0-foss-2021b R/4.2.3-foss-2022a R/4.3.1-foss-2022b RNA-SeQC/1.1.8-foss-2019b-Java-11 RNAstructure/6.2-foss-2019b-Python-3.7.4 rstudio/1.3.959-foss-2020a-Java-11-R-4.0.0 rstudio/1.2.5042-foss-2020a-Java-11-R-4.0.0 rstudio/1.3.959-foss-2019b-R-3.6.2 rstudio/1.2.5033-foss-2019b-R-3.6.2 RStudio-Server/1.4.1717-foss-2021b-Java-11-R-4.2.0 RStudio-Server/1.4.1717-foss-2021a-Java-11-R-4.1.0 RStudio-Server/1.3.1093-foss-2021a-Java-11-R-4.1.0 RStudio-Server/1.3.1093-foss-2020b-Java-11-R-4.0.3 RStudio-Server/1.4.1717-foss-2020b-Java-11-R-4.0.3 RTG-Tools/3.12.1-Java-11 Scipion/3.1.0-foss-2021a-CUDA-11.3.1 Scipion/3.0.12-foss-2021a-CUDA-11.3.1 snippy/4.6.0-foss-2019b-Perl-5.30.0 snpEff/5.0e-GCCcore-11.2.0-Java-11 snpEff/5.2c-GCCcore-12.2.0-Java-11 Spark/2.4.4-foss-2019a-Hadoop-2.7-Java-11-Python-3.7.2 Spark/3.1.1-foss-2020b SRA-Toolkit/3.0.10-gompi-2022b SRA-Toolkit/3.0.3-gompi-2022a STAR-CCM+/18.02.008 STAR-CCM+/17.02.008 Talairach/2.4.3 Trim_Galore/0.6.5-GCCcore-8.3.0-Java-11-Python-3.7.4 Trimmomatic/0.39-Java-11 Trinity/2.9.1-foss-2019b-Python-3.7.4 Trinity/2.15.1-foss-2022a Trinity/2.15.1-foss-2022b Trinity/2.9.1-foss-2019b-Python-2.7.16 WEKA/3.8.4-Java-11 Xmipp/3.22.07-Helios-foss-2021a-CUDA-11.3.1
Other Versions
These versions of Java are available on the BEAR systems (BlueBEAR and BEAR Cloud VMs). These will be retained in accordance with our Applications Support and Retention Policy.
| Version | BEAR Apps Version |
|---|---|
| 21.0.2 | 2022b |
| 17.0.6 | 2022a |
| 17.0.6 | 2022b |
| 17.0.6 | 2023a |
| 17 | 2022b |
| 13.0.2 | 2020b |
| 11.0.20 | 2023a |
| 11.0.18 | 2022b |
| 11.0.16 | 2022a |
| 11.0.2 | 2019a |
| 11.0.2 | 2019b |
| 11.0.2 | 2020a |
| 11.0.2 | 2020b |
| 11.0.2 | 2021a |
| 11.0.2 | 2021b |
| 1.8 | 2018b |
| 1.8 | 2019a |
| 1.8 | 2019b |
| 1.8 | 2019h |
| 1.8 | 2020a |
| 1.8 | 2020b |
| 1.8 | 2020h |
| 1.8.0_292-OpenJDK | 2020b |
| 1.8.0_281 | 2020b |
| 1.8.0_281 | 2021a |
| 1.8.0_241 | 2020a |
| 1.8.0_221 | 2019b |
| 1.8.0_202 | 2019a |
| 1.8.0_181 | 2018b |
| 1.7.0_80 | 2019a |
Last modified on 26th July 2021